Exploring frontiers together through data science and computational biology
Join us for a week of Nextflow goodness, where passionate Nextflow users and industry experts will share first-hand success stories from the community.
The program includes inspiring keynotes, talks, poster sessions, and social events. Summit will be streamed, and presentations will be made available after the event.
Agenda
Oct 18, 2023
2:00 - 3:00 PM (60 min)
Arrivals and registration
Oct 18, 2023, 2:00 PM CET
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3:15 - 3:30 PM (15 min)
The National Nextflow Tower Service for Australian researchers
Oct 18, 2023, 3:15 PM CET
|3:30 - 3:45 PM (15 min)
Analysing ONT long read data for cancer with Nextflow
Oct 18, 2023, 3:30 PM CET
|4:15 - 4:30 PM (15 min)
Pixelgen Technologies ❤︎ Nextflow
Oct 18, 2023, 4:15 PM CET
|4:30 - 5:00 PM (30 min)
Coffee break
Oct 18, 2023, 4:30 PM CET
|5:00 - 5:45 PM (45 min)
The modern biotech stack
Oct 18, 2023, 5:00 PM CET
|5:45 - 6:30 PM (45 min)
Biological revelations at the frontiers of a draft human pangenome reference
Oct 18, 2023, 5:45 PM CET
|Oct 19, 2023
09:30 - 10:00 AM (30 min)
Welcome coffee
Oct 19, 2023, 09:30 AM CET
|10:00 - 10:30 AM (30 min)
It’s been quite a year for research technology in the cloud: we’ve been busy
Oct 19, 2023, 10:00 AM CET
|10:30 - 10:45 AM (15 min)
nf-validation: a Nextflow plugin to validate pipeline parameters and input files
Oct 19, 2023, 10:30 AM CET
|10:45 - 11:00 AM (15 min)
Computational methods for allele-specific methylation with biomodal Duet
Oct 19, 2023, 10:45 AM CET
|11:00 - 11:15 AM (15 min)
How to use data pipelines in Machine Learning for Material Science
Oct 19, 2023, 11:00 AM CET
|11:15 - 11:30 AM (15 min)
nf-core/proteinfold: a standardized workflow framework for protein structure prediction tools
Oct 19, 2023, 11:15 AM CET
|11:30 - 12:15 PM (45 min)
Coffee break and poster session 1
Oct 19, 2023, 11:30 AM CET
|12:15 - 12:45 PM (30 min)
Automation on the Seqera Platform
Oct 19, 2023, 12:15 PM CET
|12:45 - 1:00 PM (15 min)
nf-co2footprint: a Nextflow plugin to estimate the CO2 footprint of pipeline runs
Oct 19, 2023, 12:45 PM CET
|1:00 - 1:15 PM (15 min)
Bringing spatial omics to nf-core
Oct 19, 2023, 1:00 PM CET
|1:15 - 1:30 PM (15 min)
Bioinformatics at the speed of cloud: revolutionizing genomics with Nextflow and MMCloud
Oct 19, 2023, 1:15 PM CET
|1:30 - 2:30 PM (60 min)
Lunch
Oct 19, 2023, 1:30 PM CET
|2:30 - 3:15 PM (45 min)
Enabling converged computing with the Nextflow ecosystem
Oct 19, 2023, 2:30 PM CET
|3:15 - 3:30 PM (15 min)
Cluster scalable pangenome graph construction with nf-core/pangenome
Oct 19, 2023, 3:15 PM CET
|3:30 - 3:45 PM (15 min)
Development of an integrated DNA and RNA variant calling pipeline
Oct 19, 2023, 3:30 PM CET
|3:45 - 4:00 PM (15 min)
Annotation cache: using nf-core/modules and Seqera Platform to build an AWS open data resource
Oct 19, 2023, 3:45 PM CET
|4:00 - 4:45 PM (45 min)
Coffee break and poster session 2
Oct 19, 2023, 4:00 PM CET
|4:45 - 5:00 PM (15 min)
Real-time sequencing analysis with Nextflow
Oct 19, 2023, 4:45 PM CET
|5:00 - 5:15 PM (15 min)
nf-core/sarek: a comprehensive & efficient somatic & germline variant calling workflow
Oct 19, 2023, 5:00 PM CET
|5:15 - 5:30 PM (15 min)
nf-test: a simple but powerful testing framework for Nextflow pipelines
Oct 19, 2023, 5:15 PM CET
|5:30 - 5:45 PM (15 min)
Empowering distributed precision medicine: scalable genomic analysis in clinical trial recruitment
Oct 19, 2023, 5:30 PM CET
|5:45 - 6:00 PM (15 min)
nf-core pipeline for genomic imputation: from phasing to imputation to validation
Oct 19, 2023, 5:45 PM CET
|6:00 - 6:30 PM (30 min)
Porting workflow managers to Nextflow at a national diagnostic genomics medical service – strategy and learnings
Oct 19, 2023, 6:00 PM CET
|Oct 20, 2023
09:30 - 10:00 AM (30 min)
Welcome coffee
Oct 20, 2023, 09:30 AM CET
|10:00 - 10:30 AM (30 min)
Driving discovery: contributing to the nf-core project through client collaboration
Oct 20, 2023, 10:00 AM CET
|10:30 - 10:45 AM (15 min)
Automated production engine to decode the Tree of Life
Oct 20, 2023, 10:30 AM CET
|10:45 - 11:00 AM (15 min)
Building a community: experiences from one year as a developer advocate
Oct 20, 2023, 10:45 AM CET
|11:00 - 11:15 AM (15 min)
nf-core/raredisease: a workflow to analyse data from patients with rare diseases
Oct 20, 2023, 11:00 AM CET
|11:15 - 11:30 AM (15 min)
Enabling AZ bioinformatics with Nextflow/Nextflow Tower
Oct 20, 2023, 11:15 AM CET
|11:30 - 12:00 PM (30 min)
Coffee break
Oct 20, 2023, 11:30 AM CET
|12:00 - 12:15 PM (15 min)
Bringing MultiQC into a new era
Oct 20, 2023, 12:00 PM CET
|12:15 - 12:30 PM (15 min)
nf-test at nf-core: empowering scalable and streamlined testing
Oct 20, 2023, 12:15 PM CET
|12:30 - 12:45 PM (15 min)
Performing large and reproducible GWAS analysis on biobank-scale data
Oct 20, 2023, 12:30 PM CET
|12:45 - 1:00 PM (15 min)
Highlights from the nf-core hackathon
Oct 20, 2023, 12:45 PM CET
|Immerse yourself in a vibrant atmosphere of knowledge exchange, networking, and collaboration, as we shape the path to revolutionary discoveries in the life sciences and more.
20+ Speakers
Stay tuned for exciting announcements of our distinguished speakers, and meantime check out talks given last year.