Agenda
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Tuesday, May 13
9:00am
Registration and Breakfast
Registration and Breakfast
10:00am
Hackathon Welcome
Training Welcome
Hackathon Welcome
Training Welcome
10:30am
Hackathon Session 1
Training Session 1
Hackathon Session 1
Training Session 1
1:00pm
Lunch
Lunch
2:00pm
Hackathon Session 2
Training Session 2
Hackathon Session 2
Training Session 2
4:45pm
Hackathon Wrap-up
Training Wrap-up
Hackathon Wrap-up
Training Wrap-up
5:00pm
Hackathon and Training: Social Event
Hackathon and Training: Social Event
8:00pm
Hackathon and Training: Social Event Ends
Hackathon and Training: Social Event Ends
Wednesday, May 14
9:00am
Registration and Breakfast
Registration and Breakfast
10:00am
Hackathon Session 3
Training Session 3
Hackathon Session 3
Training Session 3
1:00pm
Lunch
Lunch
2:00pm
Hackathon Session 4
Training Session 4
Hackathon Session 4
Training Session 4
4:45pm
Hackathon Wrap-up
Training Wrap-up
Hackathon Wrap-up
Training Wrap-up
5:00pm
Hackathon and Training: End
Hackathon and Training: End
Thursday, May 15
8:30am
Registration, coffee and light pastries
Registration, coffee and light pastries
9:30am
Welcome
Evan Floden
Welcome
Welcome
Evan Floden
10:20am
From Technical Debt to Sustainable Workflows: The AI-MARRVEL Nextflow Journey
Hyun-Hwan Jeong
Enabling Science
From Technical Debt to Sustainable Workflows: The AI-MARRVEL Nextflow Journey
Hyun-Hwan Jeong
10:40am
Streamlining RNA-Seq Data Analysis with rnaseq-reports
Alexandra Bartlett
Enabling Science
Streamlining RNA-Seq Data Analysis with rnaseq-reports
Alexandra Bartlett
11:00am
Coffee break and snacks
Coffee break and snacks
11:30am
Closing the Metadata Gap: Linking Sample Context to Nextflow Outputs with Quilt
Kevin Moore
Organizational Impact
Closing the Metadata Gap: Linking Sample Context to Nextflow Outputs with Quilt
Kevin Moore
11:50am
Create the best protein annotation pipeline in the world, aka Protein fasta → ??? → Profit!
Olga Botvinnik
Enabling Science
Create the best protein annotation pipeline in the world, aka Protein fasta → ??? → Profit!
Olga Botvinnik
12:10pm
SCALPEL, a Nextflow based pipeline for quantification of isoform at single-cell resolution
Franz Arnold Ake
Enabling Science
SCALPEL, a Nextflow based pipeline for quantification of isoform at single-cell resolution
Franz Arnold Ake
12:30pm
Developing a Scalable Workflow for Analyzing Long-Read 16S Sequences from Oxford Nanopore Sequencing
Adriana Messyasz
Enabling Science
Developing a Scalable Workflow for Analyzing Long-Read 16S Sequences from Oxford Nanopore Sequencing
Adriana Messyasz
12:50pm
Lightning Round
Poster Pitches
Lightning Round
1:00pm
Lunch
Lunch
2:00pm
What’s new Nextflow: Defining the future of reproducible workflows
Paolo Di Tommaso
Big Nextflow
What’s new Nextflow: Defining the future of reproducible workflows
Paolo Di Tommaso
2:30pm
What it took to run a pipeline on aarch64
Angel Pizarro
Big Nextflow
What it took to run a pipeline on aarch64
Angel Pizarro
3:00pm
Unified, community-developed analysis guidelines and templates for multi-omics data interpretability
Lorena Pantano
Big Nextflow
Unified, community-developed analysis guidelines and templates for multi-omics data interpretability
Lorena Pantano
3:20pm
Lightning Round
Poster Pitches
Lightning Round
3:30pm
Coffee break and snacks
Coffee break and snacks
4:00pm
GSK
Enabling Science
GSK
4:20pm
Seqera Fusion x NVIDIA Parabricks for Accelerated Analysis
Gary Burnett
Big Nextflow
Seqera Fusion x NVIDIA Parabricks for Accelerated Analysis
Gary Burnett
5:30pm
Summit Reception
Summit Reception
7:30pm
Summit Reception: End
Summit Reception: End
Friday, May 16
7:00am
Network: Morning Walk and Run to Seaport
Network: Morning Walk and Run to Seaport
8:30am
Welcome breakfast and coffee
Welcome breakfast and coffee
9:30am
Scale with Seqera: Accelerate, Expand, and Collaborate
Esha Joshi
Organizational Impact
Scale with Seqera: Accelerate, Expand, and Collaborate
Esha Joshi
10:00am
Integrating Bioinformatics into the Regulated Pharmaceutical Lifecycle
Brice Sarver and Kostis Karagiannis
Organizational Impact
Integrating Bioinformatics into the Regulated Pharmaceutical Lifecycle
Brice Sarver and Kostis Karagiannis
10:20am
Building an Omics Data Infrastructure to Bridge Data Management and Data Science
Juliana Assis
Organizational Impact
Building an Omics Data Infrastructure to Bridge Data Management and Data Science
Juliana Assis
10:40am
TBA
Adrianto Wirawan
Organizational Impact
TBA
Adrianto Wirawan
11:00am
Coffee break and snacks
Coffee break and snacks
11:30am
Optimizing Compute Costs with Seqera Cloud: Champions Oncology's PDX Bank and Multi-Omics Data
Gervaise Henry
Organizational Impact
Optimizing Compute Costs with Seqera Cloud: Champions Oncology's PDX Bank and Multi-Omics Data
Gervaise Henry
11:45am
DRAGoN - Divide-and-conquer strategy for processing large DRUG-seq experiments
Scott Norton
DRAGoN - Divide-and-conquer strategy for processing large DRUG-seq experiments
Scott Norton
12:00pm
Enabling Reproducible Science and African Represenation in Science through Nextflow Workshops
Olaitan Awe
Organizational Impact
Enabling Reproducible Science and African Represenation in Science through Nextflow Workshops
Olaitan Awe
12:20pm
Panel Discussion
Saba Nafees and guests
Panel Discussion
Saba Nafees and guests
1:00pm
Summit: Wrap-up
Summit: Wrap-up
1:10pm
Summit: End
Summit: End
Join us in Boston
Training
May 13-14 • training
2 days / 50 people
An in-person foundational training to supercharge your pipeline
development with Nextflow and nf-core.
Running in
parallel to the hackathon.
Hackathon
May 13-14 • hackathon
2 days / 100 people
An in-person hackathon to tackle real-world challenges, create
innovative pipelines with Nextflow, and develop nf-core.
Running in parallel to the training.
Summit
May 15-16 • talks, networking and more
1.5 days / 200+ people
A showcase of the latest developments and innovations from the Nextflow world. Session themes include: Enabling Science, Big Nextflow, and Organizational Impact.
Key dates
At a glance
Feb 10
Call for abstracts opens
Registration opens: early bird 25% off
Feb 28
Registration: early bird 15% off
Mar 14
Call for abstracts closes
Mar 28
Accepted presenters notified
April 1
Registration: full price
April 25
Registration closes
Cancellation period closes
May 13-14
Hackathon & Training
May 15-16
Nextflow Summit